Senior Automation Engineer

Posted Yesterday
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Lexington, MA, USA
Hybrid
137K-215K Annually
Senior level
Healthtech • Software • Analytics • Biotech • Pharmaceutical • Manufacturing
Takeda exists to create better health for people, brighter future for the world.
The Role
Leads the design, implementation, and lifecycle management of automated analytical testing platforms for biologics and synthetic molecules. Develops digital tools, data workflows, databases, and automated methods; partners with scientific and quality teams; manages robotic and software vendors; leads projects and change initiatives; and identifies scalable automation opportunities. The role also supports analytical method development, regulatory alignment, continuous improvement, and data-driven laboratory efficiency.
Summary Generated by Built In

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Job Description

About the role:
The Senior Automation Engineer is responsible for leading lab automation and digital capability initiatives that support in-process analytical testing across biologics and synthetic molecule testing to improve organization KPI matrix. In this role, you will help design, implement, and maintain fit-for-purpose, modular, fully automated, end-to-end analytical testing platforms and digital tools that support faster, more reliable laboratory work.
How you will contribute:

  • Lead the design, implementation, and life cycle management of modular and fully automated analytical testing platforms for in-process testing.
  • Implement digital capabilities such as agentic and non-agentic agents, visualization tools, data management platforms, and database solutions to improve business efficiency.
  • Partner with Process Development, Analytical Development, Characterization and Attribute Sciences, Quality, and Stability teams to understand their needs, reduce redundancy, and deliver lab automation solutions.
  • Lead lab automation and digital projects using clear project plans, change management approaches, and practical delivery of methods.
  • Evaluate, onboard, and manage robotic systems, software, and vendor solutions for lab automation.
  • Develop technical strategies, identify gaps and opportunities, and support decisions on automation, digital tools, and analytical method development.
  • Contribute to the value capture from automation and digital work through continuous improvement and scalable solutions.

What you bring to Takeda:

  • Either BSc., MSc., or Ph.D. in Analytical Chemistry, Pharmaceutical Sciences or related fields with lab automation and digital industry experience OR a degree in Information Technology or Computer Science with industry experience in analytical testing and method development environment.
  • Typical 3 years (PhD) or 9 years (MS) or 11 years (BS) of relevant industry experience.
  • Strong expertise in integrated and modular laboratory automation systems, including liquid handlers such as Tecan Evo® and Fluent®, and SCARA robotic modular systems such as Thermo Inspire® and HiRes FlexPod® or FlexCart®.
  • Experience developing automated analytical methods and orchestration workflows using scheduler and control platforms such as Momentum® and Cellario OS®.
  • Expertise in basic programming & coding for statistical and advanced data analytics (Py-thon®, R®); data automation platforms such as Domino® Data Lab and database solutions such as SQL.
  • Proven track record of leading projects and initiatives with minimal supervision.
  • Effective verbal, written, and scientific data presentation skills.
  • Knowledge of analytical testing methods used for in-process testing of biologics and synthetic molecules is desirable.
  • Knowledge of ICH and other regulatory guidance for analytical method development and life cycle management is desirable.
  • Exposure to chromatographic, electrophoretic, and isoelectric focusing methods, including ultra-high-performance liquid chromatography, high-performance liquid chromatography, capillary electrophoresis, CE-SDS, Maurice, LabChip GXII, or enzyme-linked immunosorbent assay methods.

Takeda Compensation and Benefits Summary

We understand compensation is an important factor as you consider the next step in your career. We are committed to equitable pay for all employees, and we strive to be more transparent with our pay practices. 

For Location:

Lexington, MA

U.S. Base Salary Range:

$137,000.00 - $215,270.00

The estimated salary range reflects an anticipated range for this position. The actual base salary offered may depend on a variety of factors, including the qualifications of the individual applicant for the position, years of relevant experience, specific and unique skills, level of education attained, certifications or other professional licenses held, and the location in which the applicant lives and/or from which they will be performing the job. The actual base salary offered will be in accordance with state or local minimum wage requirements for the job location. 


For information about our benefits, please click here.


EEO Statement

Takeda is proud in its commitment to creating a diverse workforce and providing equal employment opportunities to all employees and applicants for employment without regard to race, color, religion, sex, sexual orientation, gender identity, gender expression, parental status, national origin, age, disability, citizenship status, genetic information or characteristics, marital status, status as a Vietnam era veteran, special disabled veteran, or other protected veteran in accordance with applicable federal, state and local laws, and any other characteristic protected by law.

LocationsLexington, MA

Worker TypeEmployee

Worker Sub-TypeRegular

Time TypeFull time

Job Exempt

Yes

It is unlawful in Massachusetts to require or administer a lie detector test as a condition of employment or continued employment. An employer who violates this law shall be subject to criminal penalties and civil liability.

Skills Required

  • Bachelor’s, master’s, or doctoral degree in Analytical Chemistry, Pharmaceutical Sciences, a related field, Information Technology, or Computer Science
  • Relevant industry experience in lab automation and digital capabilities, or analytical testing and method development
  • Approximately 3 years of relevant experience with a PhD, 9 years with an MS, or 11 years with a BS
  • Expertise with integrated and modular laboratory automation systems, including liquid handlers and SCARA robotic systems
  • Experience with Tecan Evo and Fluent, Thermo Inspire, HiRes FlexPod, or FlexCart systems
  • Experience developing automated analytical methods and orchestration workflows using Momentum or Cellario OS
  • Basic programming and coding experience in Python and R for statistical and advanced data analytics
  • Experience with data automation platforms such as Domino Data Lab and database solutions such as SQL
  • Proven ability to lead projects and initiatives with minimal supervision
  • Effective verbal, written, and scientific data presentation skills
  • Knowledge of analytical testing methods for in-process testing of biologics and synthetic molecules
  • Knowledge of ICH and other regulatory guidance for analytical method development and lifecycle management
  • Exposure to chromatographic, electrophoretic, and isoelectric focusing methods
  • Experience with UHPLC, HPLC, capillary electrophoresis, CE-SDS, Maurice, LabChip GXII, or ELISA methods

Takeda Compensation & Benefits Highlights

The following summarizes recurring compensation and benefits themes identified from responses generated by popular LLMs to common candidate questions about Takeda and has not been reviewed or approved by Takeda.

  • Retirement Support — Employer-funded retirement is described as notably strong, combining a dollar-for-dollar 401(k) match with an additional company contribution that scales with age and service. Access to an employee stock purchase plan further supports long-term wealth building.
  • Parental & Family Support — Paid bonding leave for all parents, substantial adoption/surrogacy reimbursement, and robust caregiver resources (backup care and Maven family-forming support) are emphasized as core strengths. These offerings create a comprehensive safety net for a range of family situations.
  • Healthcare Strength — Multiple medical plan options (nationwide PPO/HSA and regional HMOs), employer HSA funding, and integrated mental-health and well-being programs signal depth in coverage. Preventive care is covered in-network, and plan choices by state expand access.

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The Company
HQ: Cambridge, MA
50,000 Employees
Year Founded: 1781

What We Do

For over 240 years, Takeda’s propensity to evolve has driven the next generation of innovation, and as a future-focused organization, we’re continuing to drive forward with endurance in our steadfast pursuit to achieve the best outcomes for our patients in a rapidly changing world.  We have been preparing for this period of value creation by investing in data, digital and technology, and we’re proud of our employees and their commitment to turning groundbreaking ideas into life-changing impacts.   Since our founding in Japan, integrity and putting patients first have been at the heart of our identity, and we will emerge ready for our future as one of the most trusted and science-driven digital biopharmaceutical companies. Join a team where your innovation impacts lives.   Together, we’ll realize improved outcomes by improving data quality, enhancing launch execution and improving the patient journey. You’ll play a critical role in accelerating data collection and increasing accuracy across all parts of the business. Patients across the globe will benefit from access to treatments afforded by greater opportunities and efficiency in our research and development.  

Why Work With Us

We connect to our history and Japanese heritage through everything we do to bring our purpose, values, vision, and imperatives to life. We are committed to bringing better health and a brighter future to patients. Being a part of Takeda means having the opportunity to be a part of something bigger than yourself.

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