Research Scientist - Computational Biologist

Posted 15 Days Ago
Be an Early Applicant
Indianapolis, IN, USA
In-Office
Junior
Healthtech • Pharmaceutical • Manufacturing
The Role
Use AI and structural modeling (AlphaFold, Rosetta) to design and optimize therapeutic antibodies and proteins, apply generative and structure-based ML to improve developability, analyze and validate predictions with wet-lab teams, and evaluate new computational tools to accelerate biologics discovery.
Summary Generated by Built In

At Elanco (NYSE: ELAN) – it all starts with animals!

As a global leader in animal health, we are dedicated to innovation and delivering products and services to prevent and treat disease in farm animals and pets. At Elanco, we are driven by our vision of Food and Companionship Enriching Life and our purpose – all to Go Beyond for Animals, Customers, Society and Our People.

At Elanco, we pride ourselves on fostering a diverse and inclusive work environment. We believe that diversity is the driving force behind innovation, creativity, and overall business success. Here, you’ll be part of a company that values and champions new ways of thinking, work with dynamic individuals, and acquire new skills and experiences that will propel your career to new heights.

Making animals’ lives better makes life better – join our team today!

Your Role: Research Scientist - Computational Biologist  

 

As a Research Scientist on our Discovery Research team, you will be at the forefront of Elanco’s mission to deliver innovative biologics that improve animal health. You will leverage and develop state-of-the-art AI and structural modeling tools to predict, design, and optimize therapeutic antibodies and proteins. Partnering closely with our principal Computational Scientist and wet-lab teams, you will directly impact the speed and success of our pipeline, helping to create the next generation of animal health therapies. This role offers a unique opportunity to grow your skills in a rapidly evolving field while contributing to tangible, real-world outcomes. 

 

Your Responsibilities: 

  • Utilize and develop AI-driven tools (e.g., AlphaFold, Rosetta) to predict and design high-resolution structures of antibodies and other proteins, directly supporting our therapeutic biologics pipeline. 

  • Apply generative AI and structural modeling techniques to design novel antibody and protein modalities from scratch, optimizing them for high-precision epitope targeting, affinity, and specificity. 

  • Proactively identify and engineer out potential liabilities (e.g., aggregation, immunogenicity) and train novel structure-based ML architectures to enhance the developability of our biologic candidates. 

  • Partner closely with wet-lab scientists to analyze experimental data, validate computational predictions, and rapidly iterate on designs to accelerate antibody selection and optimization. 

  • Stay current with the evolving AI landscape by evaluating new tools, maintaining thorough documentation, and effectively communicating complex findings to cross-functional teams. 

 

What You Need to Succeed (minimum qualifications): 

  • Education: Ph.D. in Computational Biology, Bioinformatics, Structural Biology, Computer Science, or a related field. 

  • Experience: 0-3 years of post-graduate experience applying computational methods to biological problems. 

  • Top Skills: A strong foundation in structural bioinformatics and AI/ML modeling, with proficiency in a programming language like Python, and the communication skills to work effectively in a cross-functional scientific environment. 

 

What will give you a strong edge (preferred qualifications): 

  • Experience with de novo protein design tools, such as diffusion models or physics-based approaches. 

  • A track record of applying computational tools to solve biological problems, evidenced by publications or significant project contributions. 

  • Familiarity with cloud computing environments (e.g., AWS, GCP) and MLOps principles. 

  • Experience in antibody or protein engineering and a foundational understanding of immunology. 

  • A proactive mindset with a passion for staying current with the rapidly evolving AI landscape and a motivation to test and evaluate new methodologies. 

 

Additional Information: 

  • Travel: Minimal 

  • Location: Global Elanco Headquarters - Indianapolis, IN - Hybrid Work Environment 

 

Don't meet every single requirement? Studies have shown underrecognized groups are less likely to apply to jobs unless they meet every single qualification. At Elanco we are dedicated to building a diverse and inclusive work environment. If you think you might be a good fit for a role but don't necessarily meet every requirement, we encourage you to apply. You may be the right candidate for this role or other roles! 

 

Elanco Benefits and Perks: 

We offer a comprehensive benefits package focusing on financial, physical, and mental well-being while encouraging our employees to pursue our purpose! Some highlights include: 

  • Multiple relocation packages 

  • Two weeklong shutdowns (mid-summer and year-end) in the US (in addition to PTO) 

  • 8-week parental leave 

  • 9 Employee Resource Groups 

  • Annual bonus offering 

  • Flexible work arrangements 

  • Up to 6% 401K matching 

 

 

Elanco is an EEO/Affirmative Action Employer and does not discriminate on the basis of age, race, color, religion, gender, sexual orientation, gender identity, gender expression, national origin, protected veteran status, disability or any other legally protected status

Elanco may use automated tools, including AI, to support parts of our recruitment process, such as reviewing applications against job‑related criteria and/or transferrable skills. These tools help ensure a consistent, structured evaluation, but they do not make hiring decisions. All decisions involve a human reviewer. For more information on how we handle personal data, please see our Elanco Workforce Privacy Notice.

Skills Required

  • Ph.D. in Computational Biology, Bioinformatics, Structural Biology, Computer Science, or related field
  • 0-3 years post-graduate experience applying computational methods to biological problems
  • Strong foundation in structural bioinformatics and AI/ML modeling
  • Proficiency in a programming language like Python
  • Effective communication skills for cross-functional scientific collaboration
  • Experience with de novo protein design tools (e.g., diffusion models or physics-based approaches)
  • Track record of applying computational tools to biological problems (publications or significant projects)
  • Familiarity with cloud computing environments (AWS, GCP) and MLOps principles
  • Experience in antibody or protein engineering and foundational immunology knowledge
  • Proactive mindset and motivation to evaluate new AI methodologies

Elanco Compensation & Benefits Highlights

The following summarizes recurring compensation and benefits themes identified from responses generated by popular LLMs to common candidate questions about Elanco and has not been reviewed or approved by Elanco.

  • Leave & Time Off Breadth Time off options are broad, including PTO, flexible leave, and the ability to purchase additional vacation. These provisions are highlighted as supportive of work-life balance.
  • Healthcare Strength Health coverage includes medical, dental, and vision alongside company-paid life, disability, and wellness support. Pet insurance and assistance programs reinforce a comprehensive wellbeing offering.
  • Retirement Support Retirement offerings include a U.S. 401(k) and, for some employees, access to a defined benefit pension. These programs add meaningful long-term value to total rewards.

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The Company
HQ: Indianapolis, IN
8,445 Employees

What We Do

At Elanco, we work to improve the health of animals through innovative products and services for pets and farm animals around the world. As a global animal health company, we provide solutions that empower our customers to advance a vision of Food and Companionship Enriching Life. Since 1954, Elanco has committed to empowering veterinarians, farmers, and all those who care for animals with the tools they need to help animals live healthy lives. Healthier animals are the key to making our lives better - This is the fundamental belief uniting all global Elanco employees. That’s why we are committed to the idea that our business can be a unique force for good for all in society. Through our Elanco Healthy Purpose™ framework of Environmental, Social and Governance (ESG) commitments, we focus on delivering sustainable solutions to advance the well-being of animals, people and the planet. This program also enables our employees around the world to take paid time off to make an impact as a volunteer, offering their time or talent to give back to our customers, causes and communities. #ElancoHealthyPurpose #WeAreElanco

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