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Job Description
Research Associate – Genotyping
The Center for Aquaculture Technologies, a private aquaculture innovation and research company, is seeking a Research Associate to assist development, optimization, and implementation of next-generation sequencing services in the Genotyping lab in San Diego, CA.
Responsibilities:
- Assist in developing SNP panels and associated assays for various species [emphasis on Next Generation Sequencing (NGS) applications on Thermo ION platform, Element Aviti Platform and Oxford Nanopore platform].
- Perform Next Generation Sequencing (NGS) library preparation/QC
- Perform high-throughput DNA extractions and quality assessments.
- Troubleshooting to improve processes and data consistency and quality.
- Develop and deploy appropriate automation to aid processing and improve throughput on the genotyping platforms.
- Work collaboratively within team settings with scientists, technicians, and other associates as well as independently within well-defined guidelines.
- Coordinate with Research Technicians on training and troubleshooting processes; and participate in laboratory upkeep including equipment maintenance, vendor sourcing and restocking supplies, and maintaining inventories.
Key Qualifications:
- Experience with assay development and library preparations on Illumina/Ion sequencing platforms (Preferably Thermo ION sequencing platform, AmpliSeq genotyping, Agriplex, PacBio and Oxford Nanopore Chemistries)
- Experience with liquid handling automation; to aid processing and improve throughput on the genotyping platforms (Preferably experience with DNA extraction systems, and with liquid handling instruments)
- Bachelor’s degree in biology, Biological Sciences, Life Science and/or a related field is required.
- Good computer skills including proficiency with Microsoft Office is required.
- Must be able to communicate effectively in both group and one on one settings.
- Must be organized, detail-oriented and meticulous in following set protocols and record keeping.
- Ability to multitask and meet deadlines in a fast-paced, production environment.
- Excellent English (both verbal and written) is required.
- Training Schedule Required (3-4 months) - Monday through Friday 9-5:30pm
CAT offers a competitive salary ($46,000-$79,000 based on experience) and benefits including a generous sick/vacation plan, and group health care and retirement savings plans.
Skills Required
- Experience with assay development and NGS library preparation on Illumina or Ion sequencing platforms
- Experience with liquid-handling automation for genotyping workflows
- Experience with Thermo Ion sequencing, AmpliSeq genotyping, Agriplex, PacBio, or Oxford Nanopore chemistries
- Experience with DNA extraction systems and liquid-handling instruments
- Bachelor’s degree in biology, biological sciences, life science, or a related field
- Proficiency with Microsoft Office and good computer skills
- Effective verbal and written communication skills
- Organization, attention to detail, meticulous protocol adherence, and accurate record keeping
- Ability to multitask and meet deadlines in a fast-paced production environment
- Excellent English verbal and written communication
- Availability for a required three- to four-month training schedule, Monday through Friday, 9:00 a.m. to 5:30 p.m.
What We Do
The Center for Aquaculture Technologies (CAT) is at the leading edge of genetic innovation within the aquaculture industry. Employing strategies that are both results-oriented and designed for maximum value, CAT provides advanced genetic services that enhance profitability while upholding sustainable practices.
