Senior Scientist Mass Spectrometrist

Posted Yesterday
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Groton, CT, USA
In-Office
94K-156K Annually
Senior level
Artificial Intelligence • Healthtech • Machine Learning • Natural Language Processing • Biotech • Pharmaceutical
We’re in relentless pursuit of breakthroughs that change patients’ lives.
The Role
Lead structural elucidation of small molecules and peptides using high-resolution mass spectrometry. Serve as subject-matter expert on MS theory, instruments, and data analysis; collaborate with cross-functional teams, develop innovative MS approaches, use digital tools, write technical reports, and present/publish findings to support pharmaceutical development.
Summary Generated by Built In
Use Your Power for Purpose
At Pfizer, our purpose is to deliver breakthroughs that change patients' lives. Central to this mission is our Research and Development team, which strives to translate advanced science and innovative technologies into impactful therapies and vaccines. Whether you are involved in discovery sciences, ensuring drug safety and efficacy, or supporting clinical trials, your role is crucial. You will leverage cutting-edge design and process development capabilities to accelerate the delivery of best-in-class medicines to patients globally.
What You Will Achieve
An opening is available for a Mass Spectrometrist in the Structure Elucidation Group within Pfizer Worldwide Research and Development's Pharmaceutical Sciences Synthetic Molecule Division in Groton, CT. The Structure Elucidation Group plays a critical role across the pharmaceutical development continuum, supporting programs from drug substance through drug product and beyond. The team is responsible for the characterization of drug candidates, degradation products, and impurities, while partners closely with technology and project teams throughout Pfizer. This role offers the opportunity to develop and have a meaningful impact by advancing the Pfizer's portfolio..
It is your innovative scientific temperament that will help in making Pfizer ready to achieve new milestones and help patients across the globe.
How You Will Achieve It
  • Elucidate chemical structures and solve scientific questions for small molecules of pharmaceutical interest using high resolution mass spectrometry tools.
  • Work within a team of disparate scientific disciplines as a subject matter expert (e.g., working closely with mass spectrometrists, NMR spectroscopists, purification scientists, analytical and organic chemists, etc.).
  • The individual will be expected to provide strong technical and strategic input to ensure efficient and timely execution of deliverables.
  • Investigate innovative scientific approaches to all aspects of mass spectrometry support for pharmaceutical development.
  • Utilize digital tools to enhance workflows.
  • Write technical documents.
  • Publish and present externally.

Qualifications
Must-Have
  • B.S./M.S. in chemistry with 9 to 11 years of experience in mass spectrometry focused on structural elucidation, or MBA/MS with 7 to 8 years of experience OR a Ph.D. 0 to 3 years of experience. in chemistry or equivalent with a focus on mass spectrometry applications (experience with peptide/proteomics preferred).
  • Strong understanding of mass spectrometry theory and applications.
  • Experience with the structure elucidation of small molecules and/or peptides.
  • Fundamental understanding of organic chemistry.
  • Familiarity with MS data analysis software for small molecules and peptides, such as Thermo Freestyle, ACD/Labs, BioPharma Finder, and Protein Metrics.
  • Ability to work independently in problem-solving and research.
  • Experience using HRMS systems, particularly Thermo Orbitrap instruments.
  • Strong communication skills.

Nice-to-Have
  • Experience in structural elucidation of small molecules using mass spectrometry. Knowledge of various ionization sources, mass analyzers and detectors required for structure elucidation of both API and complex drug product formulations.
  • Working knowledge of ionization induced fragmentation mechanisms and ability toutilize MS tools to propose solutions to a variety of structure/degradation questions. Fundamental understanding of organic chemistry.
  • A strong understanding of the theory and application of mass spectrometry. Experience with Thermo and Bruker systems.
  • Strong communication skills and a demonstrated ability to carry out independent research are required.
  • Strong interest and motivation to learn new technologies and concepts is expected.
  • Experience with MS processing software (Xcalibur, DataAnalysis, Masslynx, ACD etc.).

PHYSICAL/MENTAL REQUIREMENTS
  • This role requires the use of laboratory equipment and working in laboratories.
  • A pplicant must be able to adhere to safe laboratory practices. Some lifting may be required.

NON-STANDARD WORK SCHEDULE, TRAVEL OR ENVIRONMENT REQUIREMENTS
  • Relocation support available
  • Work Location Assignment: On Premise
The annual base salary for this position ranges from $93,600.00 to $156,000.00. In addition, this position is eligible for participation in Pfizer's Global Performance Plan with a bonus target of 12.5% of the base salary and eligibility to participate in our share based long term incentive program. We offer comprehensive and generous benefits and programs to help our colleagues lead healthy lives and to support each of life's moments. Benefits offered include a 401(k) plan with Pfizer Matching Contributions and an additional Pfizer Retirement Savings Contribution, paid vacation, holiday and personal days, paid caregiver/parental and medical leave, and health benefits to include medical, prescription drug, dental and vision coverage. Learn more at Pfizer Candidate Site - U.S. Benefits | (uscandidates.mypfizerbenefits.com). Pfizer compensation structures and benefit packages are aligned based on the location of hire. The United States salary range provided does not apply to Tampa, FL or any location outside of the United States.
Relocation assistance may be available based on business needs and/or eligibility.
Candidates must be authorized to be employed in the U.S. by any employer.
U.S. work visa sponsorship (such as TN, O-1, H-1B, etc.) is not available for this role now or in the future.
Sunshine Act
Pfizer reports payments and other transfers of value to health care providers as required by federal and state transparency laws and implementing regulations. These laws and regulations require Pfizer to provide government agencies with information such as a health care provider's name, address and the type of payments or other value received, generally for public disclosure. Subject to further legal review and statutory or regulatory clarification, which Pfizer intends to pursue, reimbursement of recruiting expenses for licensed physicians may constitute a reportable transfer of value under the federal transparency law commonly known as the Sunshine Act. Therefore, if you are a licensed physician who incurs recruiting expenses as a result of interviewing with Pfizer that we pay or reimburse, your name, address and the amount of payments made currently will be reported to the government. If you have questions regarding this matter, please do not hesitate to contact your Talent Acquisition representative.
EEO & Employment Eligibility
Pfizer is committed to equal opportunity in the terms and conditions of employment for all employees and job applicants without regard to race, color, religion, sex, sexual orientation, age, gender identity or gender expression, national origin, disability or veteran status. Pfizer also complies with all applicable national, state and local laws governing nondiscrimination in employment as well as work authorization and employment eligibility verification requirements of the Immigration and Nationality Act and IRCA. Pfizer is an E-Verify employer. This position requires permanent work authorization in the United States.
Pfizer endeavors to make www.pfizer.com/careers accessible to all users. If you would like to contact us regarding the accessibility of our website or need assistance completing the application process and/or interviewing, please email [email protected] . This is to be used solely for accommodation requests with respect to the accessibility of our website, online application process and/or interviewing. Requests for any other reason will not be returned.
To learn more about acceptable and prohibited uses of AI during the recruitment process, please review our candidate AI-use guidelines available on Pfizer Careers .
Research and Development

Skills Required

  • B.S./M.S. in chemistry with 9-11 years mass spectrometry structural elucidation experience, or MBA/MS with 7-8 years, or Ph.D. with 0-3 years (chemistry or equivalent).
  • Experience with peptide/proteomics (preferred as part of education/experience bullet).
  • Strong understanding of mass spectrometry theory and applications.
  • Experience with structure elucidation of small molecules and/or peptides.
  • Fundamental understanding of organic chemistry.
  • Familiarity with MS data analysis software (Thermo Freestyle, ACD/Labs, BioPharma Finder, Protein Metrics).
  • Experience using HRMS systems, particularly Thermo Orbitrap instruments.
  • Ability to work independently in problem-solving and research.
  • Strong communication skills.
  • Working in laboratories and ability to adhere to safe laboratory practices; some lifting may be required.
  • U.S. work authorization (must be authorized to be employed in the U.S.).
  • Knowledge of various ionization sources, mass analyzers and detectors for API and complex formulations.
  • Working knowledge of ionization-induced fragmentation mechanisms and using MS to propose structure/degradation solutions.
  • Experience with Thermo and Bruker systems.
  • Experience with MS processing software (Xcalibur, DataAnalysis, MassLynx, ACD etc.).
  • Strong interest and motivation to learn new technologies and concepts.

What the Team is Saying

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Pfizer Compensation & Benefits Highlights

  • Healthcare Strength Official materials describe comprehensive medical, dental, vision, and mental-health support, plus fertility/family‑building and transgender‑inclusive coverage; eligible Pfizer medications are noted as available at no cost in U.S. plans. Wellness resources such as telehealth and preventative programs are also emphasized.
  • Retirement Support Company documents highlight a 401(k) with matching contributions plus an additional Retirement Savings Contribution beyond the match. Financial planning support and company‑paid life and disability insurance further bolster long‑term security.
  • Leave & Time Off Breadth Corporate pages and job postings describe paid vacation and holidays, caregiver leave, and paid parental leave for both parents. Materials also note that details can vary by role and location.

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The Company
HQ: New York, NY
121,990 Employees
Year Founded: 1848

What We Do

Our purpose ensures that patients remain at the center of all we do. We live our purpose by sourcing the best science in the world; partnering with others in the healthcare system to improve access to our medicines; using digital technologies to enhance our drug discovery and development, as well as patient outcomes; and leading the conversation to advocate for pro-innovation/pro-patient policies.

Why Work With Us

We are the inventors, the problem solvers, the big thinkers — those who surmount any hurdle to deliver breakthrough medicines to the people who are counting on them the most.

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