Senior Scientist II/Principal Scientist, Molecular Cloning Technologies

Reposted Yesterday
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Cambridge, MA, USA
In-Office
143K-215K Annually
Senior level
Biotech
The Role
Lead development and scaling of cloning and construct generation capabilities, define cloning strategy, implement high-throughput DNA assembly and automation workflows, improve throughput and quality, partner cross-functionally, mentor scientists, and represent cloning capabilities externally to accelerate RNA-based agricultural product development.
Summary Generated by Built In

COMPANY DESCRIPTION  

Founded through Flagship Pioneering’s venture creation engine, Terrana Biosciences is a cutting-edge agricultural biotechnology company developing innovative RNA-based products to address global agricultural challenges. We are committed to advancing sustainable farming solutions through precision technologies that ensure environmental safety and regulatory compliance. 

THE ROLE 

Terrana Biosciences is building a new generation of RNA-based technologies to transform agriculture. We are seeking an innovative and strategic Principal Scientist, Molecular Cloning Technologies to lead the vision, development, and scaling of cloning and construct generation capabilities across the company. 

As a scientific leader, you will define and drive cloning strategies that accelerate discovery, platform development, and product advancement. You will serve as the technical authority for molecular cloning technologies, develop novel high-throughput workflows, and identify emerging approaches that strengthen Terrana's RNA technology platform. This role requires a highly creative scientist who thrives at the intersection of technology innovation, scientific leadership, and operational excellence. 

KEY RESPONSIBILITIES 

  • Define and execute the long-term cloning strategy supporting Terrana's research and platform development efforts.
  • Own the cloning function and construct generation operations at Terrana, ensuring reliable, scalable, and cost-effective delivery of high-quality constructs supporting company pipeline activities.
  • Conceive, develop, and implement novel cloning technologies, workflows, and automation solutions to enable rapid construct generation and testing.
  • Drive continuous improvements in construct generation throughput, turnaround time, automation, quality, and unit economics while expanding organizational capacity.
  • Lead innovation in high-throughput DNA assembly, plasmid engineering, vector development, and viral engineering technologies.
  • Evaluate emerging technologies and establish new capabilities that improve speed, scale, quality, and efficiency.
  • Partner closely with Molecular Biology, Delivery, Discovery, Sequencing, and Bioinformatics teams to enable key research objectives and accelerate innovation.
  • Mentor scientists and contribute to the development of technical talent and scientific culture across the organization.
  • Drive external collaborations and represent Terrana's cloning capabilities with scientific partners and collaborators.
  • Communicate scientific strategy, findings, and recommendations to senior leadership. 

PROFESSIONAL EXPERIENCE & QUALIFICATIONS 

  • Ph.D. in Molecular Biology, Synthetic Biology, Biotechnology, Biochemistry, Plant Biology, or a related field.
    • Senior Scientist II: Ph.D. and 8-11 years of relevant industry and/or postdoctoral experience with a demonstrated record of scientific leadership and innovation. 
    • Principal Scientist: Ph.D. and 12+ years of relevant industry and/or postdoctoral experience with a demonstrated record of scientific leadership and innovation.
  • Demonstrated ability to balance scientific leadership with hands-on laboratory execution in a fast-paced, resource-constrained environment.
  • Deep expertise in molecular cloning, DNA assembly technologies, vector engineering, and construct design.
  • Proven track record of developing and implementing novel technologies or platform capabilities.
  • Experience leading complex, cross-functional scientific initiatives from concept to execution.
  • Experience developing, implementing, and scaling high-throughput cloning workflows, laboratory automation solutions, and production operations.
  • Strong communication, influence, and problem-solving skills.
  • Demonstrated creativity, scientific rigor, and an entrepreneurial mindset. 

Preferred Qualifications 

  • Expertise in viral vector biology, host-virus interactions, plant virology, or RNA virus engineering.
  • Experience in agricultural biotechnology, plant biology, microbial engineering, or RNA-based technologies.
  • Familiarity with automated liquid handling platforms and laboratory information management systems (LIMS).
  • Working knowledge of sequencing-based construct verification and associated data analysis workflows. 

Location: Cambridge, MA 

ABOUT FLAGSHIP PIONEERING: 

Flagship Pioneering invents and builds platform companies, each with the potential for multiple products that transform human health, sustainability and beyond. Since its launch in 2000, Flagship has originated more than 100 companies. Many of these companies have addressed humanity’s most urgent challenges: vaccinating billions of people against COVID-19, curing intractable diseases, improving human health, preempting illness, and feeding the world by improving the resiliency and sustainability of agriculture.   

Flagship has been recognized twice on FORTUNE’s “Change the World” list, an annual ranking of companies that have made a positive social and environmental impact through activities that are part of their core business strategies and has been twice named to Fast Company’s annual list of the World’s Most Innovative Companies. Learn more about Flagship at www.flagshippioneering.com. 

At Flagship, we accept impossible missions to enable bigger leaps. Our core values guide us through uncertainty and toward lasting impact. 

We are an equal opportunity employer. All qualified applicants will be considered for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, protected veteran status, or any other characteristic protected by law. 

We recognize that great candidates often bring unique strengths without fulfilling every qualification. If you have some of the experience listed above but not all, please apply anyway. We are dedicated to building diverse and inclusive teams and look forward to learning more about your background and interest in Flagship. 

Recruitment & Staffing Agencies: Flagship Pioneering and its affiliated Flagship Lab companies (collectively, “FSP”) do not accept unsolicited resumes from any source other than candidates. The submission of unsolicited resumes by recruitment or staffing agencies to FSP or its employees is strictly prohibited unless contacted directly by Flagship Pioneering’s internal Talent Acquisition team. Any resume submitted by an agency in the absence of a signed agreement will automatically become the property of FSP, and FSP will not owe any referral or other fees with respect thereto. 

#LI-TL1 

The salary range for this role is $143,000 - $214,500. Compensation for the role will depend on a number of factors, including a candidate’s qualifications, skills, competencies, and experience. Terrana Biosciences, Inc. currently offers healthcare coverage, annual incentive program, retirement benefits and a broad range of other benefits. Compensation and benefits information is based on Terrana Biosciences, Inc.'s good faith estimate as of the date of publication and may be modified in the future.


Privacy Notice for Applicants: When you apply for a role at Flagship Pioneering or one of its portfolio companies, we collect and use personal information you provide (such as your name, contact details, work history, and application materials) to evaluate your application, communicate with you, and comply with legal obligations. Your application data is processed through Greenhouse, our applicant tracking system, and may also be reviewed using AI-assisted screening tools. We do not sell your personal information. California residents have rights under the CCPA/CPRA including to know, delete, and opt out of the sharing of their personal information. If you are located in the EU or UK, we process your data under GDPR and you have rights to access, rectify, and erase your data. To exercise your rights or for questions, contact [email protected]

Skills Required

  • Ph.D. in Molecular Biology, Synthetic Biology, Biotechnology, Biochemistry, Plant Biology, or related field
  • Senior Scientist II: Ph.D. and 8-11 years of relevant industry and/or postdoctoral experience
  • Principal Scientist: Ph.D. and 12+ years of relevant industry and/or postdoctoral experience
  • Deep expertise in molecular cloning, DNA assembly technologies, vector engineering, and construct design
  • Proven track record of developing and implementing novel technologies or platform capabilities
  • Experience leading complex, cross-functional scientific initiatives from concept to execution
  • Experience developing, implementing, and scaling high-throughput cloning workflows, laboratory automation solutions, and production operations
  • Demonstrated ability to balance scientific leadership with hands-on laboratory execution in a fast-paced, resource-constrained environment
  • Strong communication, influence, and problem-solving skills
  • Demonstrated creativity, scientific rigor, and entrepreneurial mindset
  • Familiarity with automated liquid handling platforms and laboratory information management systems (LIMS)
  • Working knowledge of sequencing-based construct verification and associated data analysis workflows
  • Expertise in viral vector biology, host-virus interactions, plant virology, or RNA virus engineering
  • Experience in agricultural biotechnology, plant biology, microbial engineering, or RNA-based technologies

Flagship Pioneering Compensation & Benefits Highlights

The following summarizes recurring compensation and benefits themes identified from responses generated by popular LLMs to common candidate questions about Flagship Pioneering and has not been reviewed or approved by Flagship Pioneering.

  • Fair & Transparent Compensation Feedback suggests salary bands are visible for many Boston/Cambridge roles and pay is considered competitive for key scientific and leadership positions. Transparency in postings supports expectations that offers align with local biotech norms.
  • Healthcare Strength Feedback suggests medical, dental, vision, disability, life insurance, HSA options, and mental-health coverage are comprehensive and well-regarded. Multiple items are employer-verified, reinforcing confidence in core health benefits.
  • Parental & Family Support Feedback suggests maternity/paternity leave and family leave are offered at meaningful levels. These programs sit alongside paid holidays, sick days, and PTO to support family needs.

Flagship Pioneering Insights

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The Company
HQ: Cambridge, MA
475 Employees
Year Founded: 2000

What We Do

Flagship Pioneering conceives, creates, resources, and develops first-in-category life sciences companies to transform human health and sustainability. Since its launch in 2000, the firm has applied a unique, hypothesis-driven innovation process to originate and foster more than 100 scientific ventures, resulting in over $30 billion in aggregate value. To date, Flagship is backed by >$3 billion of aggregate capital commitments, of which over $1.5 billion has been deployed toward the founding and growth of its pioneering companies alongside >$10 billion of follow-on investments from other institutions. The current Flagship ecosystem includes Denali Therapeutics (NASDAQ: DNLI), Evelo Biosciences (NASDAQ: EVLO), Moderna Therapeutics (NASDAQ: MRNA), Rubius Therapeutics (NASDAQ: RUBY), Seres Therapeutics (NASDAQ: MCRB), and Syros Pharmaceuticals (NASDAQ: SYRS).

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