Senior Informatics Engineer

Reposted 3 Days Ago
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Millbrae, CA, USA
In-Office
134K-162K Annually
Senior level
Healthtech • Biotech • Pharmaceutical
The Role
Design, implement, and maintain informatics systems (LIMS/ELN, inventory, data lake) and AI/ML-enabled workflows to support R&D. Build ETL pipelines, integrate systems, gather requirements from scientists, document architectures, train users, and contribute to enterprise data platform and automation to accelerate research decision-making.
Summary Generated by Built In

Eikon Therapeutics is a new biopharmaceutical company employing revolutionary technology at the intersection of chemistry, engineering, computation, and biology to discover novel treatments for life-threatening diseases. Eikon’s discovery platform is built on groundbreaking innovations from its founders (Nobel Prize, 2014), culminating in the creation of microscopes which enable real time, molecular-resolution measurements of protein movement in living cells, thereby unlocking otherwise intractable classes of proteins as drug targets.

Position

We are currently seeking an experienced Informatics Engineer to contribute to the design, implementation, and development of our informatics processes and systems in support of all phases of our research pipelines. You will work closely with our scientists and engineers to capture and manage functional requirements, and you will be a core member of a team responsible for building scalable, AI-enabled solutions that fit into our information ecosystem and ensure the integrity of our data architecture.

About You

You are agile of mind and effectively communicate difficult concepts. You work well within a fast-paced, mission-driven, dynamic environment and possess a deep desire to pursue creative solutions with broad guidance and a high degree of independence. You are prepared to tackle a broad selection of challenges as the company grows. You can partner with R&D leadership and functional area scientists to proactively identify areas of need, design solutions, prioritize work, make “build versus buy” decisions, coordinate pilot studies, ensure appropriate system usage, and regularly report on system metrics and portfolio execution.

What You'll Do

  • Actively participate in the administration, design, implementation, integration, development, and testing of informatics solutions, including LIMS/ELN software (e.g., Dotmatics, CDD Vault), Inventory Management systems (e.g. Mosaic), and AI/ML platforms (e.g., Databricks), to support R&D projects and scientific workflows
  • Design, build, and deploy AI agentic tools and LLM-powered workflows that automate scientific data processes and accelerate research decision-making
  • Implement data warehouse / data lake systems and ETL pipelines to support advanced analytics and AI/ML strategy
  • Design and build data automation pipelines and ETL processes that ingest, transform, and harmonize research data from multiple sources
  • Collaborate with a cross-functional team to develop an end-to-end digital architecture roadmap
  • Work with project stakeholders to analyze data management, data access, analytics, and visualization needs across R&D functions
  • Gather user stories, design applications, implement and integrate systems, and guide the functionality of IT systems across the company
  • Ensure that systems are fully documented with system requirements, architectural design, and operational plans
  • Coordinate the training and support of end-users on system usage and best practices
  • Participate in the design of enterprise-wide data platform architecture and ensure systems adhere to that architecture
  • Stay up to date with emerging technologies and trends in LIMS engineering, AI/ML platforms, and agentic systems

Qualifications

  • BS plus 5 years of relevant experience or MS plus 3 years of relevant experience in computer science, life science, engineering, or a related field, or equivalent training, fellowship, and/or work experience
  • Experience with ELN, LIMS, scientific data management, compound registration, sample inventory, instrument data capture, and assay results, such as Dotmatics and CDD Vault
  • Experience with the administration, implementation, and integration of AI/ML and data lake platforms, such as Databricks
  • Hands-on experience building AI agentic workflows or LLM-integrated applications, and applying them to real research or data problems
  • Applicable experience in software development and/or systems integration, preferably within a scientific or laboratory environment, especially one related to drug development
  • Experience with programming, scripting, and query languages and platforms such as Python, SQL, JavaScript (React) and Java
  • Experience with different types of data storage implementations, relational and non-relational (e.g., key-value, document, SQL, graph databases), and optimizing data storage using a mix of approaches
  • Familiarity with Docker, containerized applications, and AWS cloud computing services
  • Experience documenting detailed software requirements, user stories, business processes, and/or software specifications for both custom and Commercial-Off-The-Shelf (COTS) systems
  • Familiarity with laboratory operations and workflows, and experience designing, implementing, and maintaining computational workflows involving multiple modular steps
  • Proven experience working closely with scientific stakeholders to understand their informatics needs, and subsequently defining complex system requirements, scope, objectives, and key results in the context of larger organizational goals
  • Experience working in a life sciences or biopharmaceutical environment such as early-stage research, drug discovery, or another biological sciences discipline is preferred
  • Excellent problem-solving and analytical skills in a fast-paced R&D environment where product requirements and internal software tools may change over time
  • Demonstrated success working independently on initiatives of high complexity, uncertainty, and risk with minimal guidance and direction
  • Able to present your work, both verbally and in writing, to diverse audiences including scientific stakeholders, technical teams, and research leadership

At Eikon, employee compensation also includes bonus and equity compensation, in addition to several generous benefit programs, including:​

  • 401k plan with company matching​
  • Medical (premiums covered by Eikon at 95%), dental and vision insurance (premiums covered by Eikon at 100%)​
  • Mental health and wellness benefits​
  • Weeklong summer and winter holiday shutdowns​
  • Generous paid time off and holiday policies​
  • Life/AD&D Insurance (premiums covered by Eikon at 100%) and optional supplemental employee-paid life/AD&D policies ​
  • Enhanced parental leave benefit​
  • Daily subsidized lunch program when on-site​

The expected salary range for this role is $134,000 to $161,700 depending on skills, competency, and the market demand for your expertise.

Eikon is proud to be an equal opportunity employer and will consider all qualified applicants for employment.

We are currently not accepting any new third-party agencies or firms at this time. Please do not forward unsolicited agency resumes to our website, employees or Human Resources. Eikon Therapeutics will not pay fees to any third-party agency or firm associated with unsolicited resumes.

Skills Required

  • BS + 5 years relevant experience or MS + 3 years (or equivalent) in computer science, life science, engineering, or related field
  • Experience with ELN/LIMS and scientific data management (e.g., Dotmatics, CDD Vault)
  • Experience administering, implementing, and integrating AI/ML and data lake platforms (e.g., Databricks)
  • Hands-on experience building AI agentic workflows or LLM-integrated applications applied to research or data problems
  • Software development or systems integration experience, preferably within a laboratory or scientific environment
  • Proficiency with programming, scripting, and query languages: Python, SQL, JavaScript (React), and Java
  • Experience designing and optimizing data storage across relational and non-relational databases (key-value, document, SQL, graph)
  • Experience implementing data warehouse/data lake systems and building ETL pipelines
  • Familiarity with Docker, containerized applications, and AWS cloud services
  • Experience documenting software requirements, user stories, business processes, and specifications for custom and COTS systems
  • Familiarity with laboratory operations, instrument data capture, compound registration, sample inventory, and assay results workflows
  • Proven experience partnering with scientific stakeholders to define system requirements, scope, and objectives
  • Strong problem-solving, analytical skills, and ability to work independently on complex initiatives
  • Experience working in life sciences or biopharmaceutical environment (early-stage research, drug discovery)
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The Company
HQ: Millbrae, CA
350 Employees
Year Founded: 2019

What We Do

Eikon Therapeutics is a new biopharmaceutical company employing revolutionary technology at the interface of biology, engineering and chemistry to discover novel treatments for life-threatening diseases. Eikon’s discovery platform is built on groundbreaking innovations from its founders (Nobel Prize, 2014), culminating in the creation of microscopes which enable real time, molecular-resolution measurements of protein movement in living cells. By directly measuring the effects of chemical compounds on the behavior of protein molecules in a live cellular environment, Eikon’s landmark assays facilitate the highly sensitive identification of compound-protein interactions that could not be identified through traditional assays, thereby unlocking otherwise intractable classes of proteins as drug targets. Furthermore, the ability to directly visualize protein mechanisms in disease coupled with the extraordinarily high-powered high-content data sets generated by Eikon’s drug-screening technology enable an unprecedented opportunity to quantitatively explore novel biology in the living cell. These insights facilitate creation and application of data-driven hypotheses to the discovery of life-saving therapies. Eikon is seeking adventurous, passionate and creative team members eager to apply their talents to empower interdisciplinary scientific exploration, inaugurate a radical drug-discovery paradigm, and ultimately create novel medicines. To learn more about open positions, please visit: https://eikontx.com/team#positions

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