Principal Scientist I, Molecular Lab Research and Early Development

Posted 4 Days Ago
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Pleasanton, CA, USA
In-Office
111K-207K Annually
Senior level
Healthtech • Biotech • Pharmaceutical
The Role
Hands-on role developing and optimizing novel NGS sequencing assays on the Axelios SBX platform. Lead experimental design, troubleshooting, and assay transfer to CLIA labs. Collaborate with commercial partners and bioinformatics to analyze data, document SOPs, mentor junior scientists, and drive strategic R&D initiatives to support pharma collaborations and diagnostic assay adoption.
Summary Generated by Built In

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture encourages personal expression, open dialogue, and genuine connections,  where you are valued, accepted and respected for who you are, allowing you to thrive both personally and professionally. This is how we aim to prevent, stop and cure diseases and ensure everyone has access to healthcare today and for generations to come. Join Roche, where every voice matters.

The Position

At Roche, we are passionate about transforming patients' lives and are bold in both decision and action. We believe that good business means a better world. This is why we come to work each day, committed to scientific rigor, unassailable ethics, and ensuring access to medical innovations for all. We do this today to build a better tomorrow.

We are seeking a Principal Scientist I to join our Molecular Lab, Research and Early Development Team, Oncology and Genetics. Within the Roche Diagnostics organization, our Research and Early Development teams are committed to making a tangible impact on the future of healthcare. The Principal Scientist I brings technical depth and breadth, curiosity, and the creativity to be an important contributor in developing novel molecular diagnostic assays. The goal will be to build sequencing assays on our revolutionary Axelios Sequencing platform and translating the immense potential of our Sequencing by Expansion (SBX) technology into real-world assays that can benefit patients. This is a hands-on, lab-based role where scientific excellence and a proactive, results-oriented mindset are paramount. You will spearhead innovative projects and key collaborations, driving the science from the initial idea to a fully realized solution. 

This is an opportunity for a visionary scientist to not only pioneer new workflows but to help shape the next generation of medical innovation.

The Opportunity

  • You will join a diverse local team of dedicated and curious scientists where you will role-model leadership qualities, mentor junior scientists, and champion a culture of scientific rigor and innovation. 

  • You will prototype and optimize different sequencing assay workflows by aligning pharma project needs, designing and implementing rigorous experiments, and applying established and innovative procedures to enable end-to-end solutions; You will proactively highlight issues, troubleshoot assays, and resolve technical challenges by applying broad knowledge of molecular biology techniques and accumulated experience

  • You will work closely with the commercial team, external pharma partners, and internal bioinformatics colleagues to implement and analyze novel workflows to further pharma collaborations. You'll translate complex data into meaningful interpretations for internal and external stakeholders.

  • You will support the adoption of Axelios sequencing technology and the growth of the pharma service business by executing pilot collaboration projects, creating technical documentations including standard operating protocols, and supporting assay transfer to the CLIA laboratory.

  • You will identify and champion new technological opportunities, contributing to the  strategic direction of the R&D organization. 
     

This position is based on-site (4+ days) in Pleasanton, CA.
There is no relocation support.

Who You Are:
(Required)

  • You have a PhD in Bioengineering, Molecular Biology, Genetics, Biochemistry, (or a related field) with 5+ years of relevant industry experience

  • You have a deep understanding of molecular biology in NGS workflows beyond routine preparation of sequencing libraries.

  • You have demonstrated experience designing and optimizing novel NGS workflows.

  • You have demonstrated the ability to critically examine assay workflows and troubleshoot unknown and unfamiliar issues.

  • You have experience with diagnostic assay development, including a high level understanding of the regulatory framework for RUO, LDT, or IVD assays

  • You have demonstrated proficiency in interpreting standard bioinformatics pipeline outputs and sequencing metrics for genomic analysis.

  • You have excellent interpersonal and communication skills, with a proven ability to identify areas of misalignment and collaborate effectively within and across teams.

  • You have excellent organizational skills, including the ability to efficiently evaluate, prioritize and handle multiple changing projects and priorities; you complete work in a timely, accurate and thorough manner 
     

Preferred:

  • You have experience beyond standard library preparation from DNA or RNA, such as single-cell sequencing, protein detection by sequencing, or spatial sequencing.

  • You have experience working with different NGS instruments (e.g. Element, Ultima, Pacbio, Oxford)

  • You have experience with automating sequencing workflow on systems like the Hamilton or Tecan

  • You have a strong record of innovation, demonstrated by publications and patents. 

  • You are proficient in technical writing

The expected salary range for this position is based on the primary location of Pleasanton, CA  is $111,000 - $206,500. Actual pay will be determined based on experience, qualifications, geographic location, and other job-related factors permitted by law.  A discretionary annual bonus may be available based on individual and Company performance. 

This position also qualifies for the benefits detailed at the link provided below.
Benefits

#NMK62026DIA

 

 

Who we are

A healthier future drives us to innovate. Together, more than 100’000 employees across the globe are dedicated to advance science, ensuring everyone has access to healthcare today and for generations to come. Our efforts result in more than 26 million people treated with our medicines and over 30 billion tests conducted using our Diagnostics products. We empower each other to explore new possibilities, foster creativity, and keep our ambitions high, so we can deliver life-changing healthcare solutions that make a global impact.


Let’s build a healthier future, together.

Roche is an equal opportunity employer. It is our policy and practice to employ, promote, and otherwise treat any and all employees and applicants on the basis of merit, qualifications, and competence. The company's policy prohibits unlawful discrimination, including but not limited to, discrimination on the basis of Protected Veteran status, individuals with disabilities status, and consistent with all federal, state, or local laws.

If you have a disability and need an accommodation in relation to the online application process, please contact us by completing this form Accommodations for Applicants.

Skills Required

  • PhD in Bioengineering, Molecular Biology, Genetics, Biochemistry, or related field with 5+ years relevant industry experience
  • Deep understanding of molecular biology in NGS workflows beyond routine library preparation
  • Demonstrated experience designing and optimizing novel NGS workflows
  • Demonstrated ability to critically examine and troubleshoot assay workflows and unknown issues
  • Experience with diagnostic assay development and understanding of RUO, LDT, or IVD regulatory frameworks
  • Proficiency interpreting standard bioinformatics pipeline outputs and sequencing metrics
  • Excellent interpersonal and communication skills and ability to collaborate across teams
  • Excellent organizational skills with ability to manage multiple changing projects and priorities
  • Experience with single-cell, protein-detection-by-sequencing, or spatial sequencing
  • Experience with NGS instruments (Element, Ultima, PacBio, Oxford Nanopore)
  • Experience automating workflows on Hamilton or Tecan platforms
  • Record of publications and patents demonstrating innovation
  • Proficiency in technical writing

Roche Compensation & Benefits Highlights

The following summarizes recurring compensation and benefits themes identified from responses generated by popular LLMs to common candidate questions about Roche and has not been reviewed or approved by Roche.

  • Retirement Support U.S. materials describe a 401(k) with both matching and an additional company contribution, supported by formal plan documents and true‑up features. This structure is positioned as a standout element of the total package, particularly at Genentech.
  • Leave & Time Off Breadth Time‑off provisions include substantial vacation, a year‑end shutdown, and a paid six‑week sabbatical after six years. These elements indicate a recharge‑oriented approach within the U.S. offering.
  • Healthcare Strength Company materials emphasize comprehensive medical, dental, vision, and mental‑health resources alongside well‑being programs. Benefits pages consistently highlight breadth across core health coverage elements.

Roche Insights

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The Company
Provincia de Buenos Aires
93,797 Employees
Year Founded: 1896

What We Do

Roche is a global pioneer in pharmaceuticals and diagnostics focused on advancing science to improve people’s lives. The combined strengths of pharmaceuticals and diagnostics under one roof have made Roche the leader in personalised healthcare – a strategy that aims to fit the right treatment to each patient in the best way possible. Roche is the world’s largest biotech company, with truly differentiated medicines in oncology, immunology, infectious diseases, ophthalmology and diseases of the central nervous system. Roche is also the world leader in in vitro diagnostics and tissue-based cancer diagnostics, and a frontrunner in diabetes management. Founded in 1896, Roche continues to search for better ways to prevent, diagnose and treat diseases and make a sustainable contribution to society. The company also aims to improve patient access to medical innovations by working with all relevant stakeholders. Thirty medicines developed by Roche are included in the World Health Organization Model Lists of Essential Medicines, among them life-saving antibiotics, antimalarials and cancer medicines. Roche has been recognised as the Group Leader in sustainability within the Pharmaceuticals, Biotechnology & Life Sciences Industry ten years in a row by the Dow Jones Sustainability Indices (DJSI).

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