Senior HPC Engineer

Reposted 24 Days Ago
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Portugal
Senior level
Artificial Intelligence • Healthtech • Information Technology • Machine Learning • Biotech • Pharmaceutical • Big Data Analytics
Data Science, AI/ML & informatics leader helping life science & healthcare companies accelerate breakthrough innovations
The Role
The Senior HPC Engineer will manage HPC clusters, optimize performance, support Linux systems, and streamline deployment processes. Experience in RHEL and scripting is required.
Summary Generated by Built In

We are looking for an experienced Linux engineer for a full-time position. The position’s main focus will be to support high performance computing (HPC) clusters. Most Linux footprint within the environment is RHEL-based, deployed both on-prem and in cloud. Additional focus will be on supporting, building, and maintaining the scientific software, which will require some basic development skills (scripting languages, makefiles, etc.). Candidates are expected to work with various internal technical teams to manage and further develop the growing infrastructure, streamline management and operation of the footprint.

Location:

Quantori is an international team: we have colleagues who work not only from office but also remotely from all over the world.

Responsibilities:
  • Manage HPC cluster configuration and Linux based computation servers, as well as provide performance tuning.
  • Assist in resolving performance issues on the cluster, help with designing HPC jobs.
  • Install, configure, and manage Linux systems throughout the environment using HPC-specific software.
  • Apply consistent security configuration standards across the Linux infrastructure
  • Implement and maintain management and monitoring tools.
  • Develop opportunities to streamline and automate deployment and configuration tasks.
  • Provide technical support and guidance for Linux deployments.
  • Build from source, install, configure, and manage linux applications on the cluster.
What we expect:
  • Experience in supporting production RHEL-like Linux servers and applications (5+ years), general knowledge of common open-source applications, such as NGINX, PostgreSQL, MariaDB, and Git
  • General understanding of services like DHCP/DNS/NTP
  • Experience with Ansible or similar configuration-as-a-code software: 3+ years
  • Comfortable with configuring OS images from scratch
  • Comfortable with building software from the source code, understanding the concept of dependencies, libraries, and linking
  • Background in remote management of large on-prem infrastructure (multiple servers, switches, storages, etc.)
  • Excellent communication and interpersonal skills
  • Performance optimization skills in Linux
  • Excellent communication skills with the English proficiency of at least B2+ 
Nice to have:
  • AWS: hands-on experience with production environment
  • Hands-on experience with HPC cluster software: Bright Cluster Manager, Univa Grid Engine, Slurm, EasyBuild, Spack
  • Python/R or similar scripting language
We offer:
  • Competitive compensation
  • Remote or office work
  • Flexible working hours
  • Healthcare benefits: medical insurance and paid sick leave
  • Continuous education, mentoring, and professional development programs
  • A team with an excellent tech expertise
  • Certifications paid by the company

Top Skills

Ansible
AWS
Bright Cluster Manager
Easybuild
Git
Linux
Mariadb
Nginx
Postgres
Python
R
Rhel
Slurm
Spack
Univa Grid Engine
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The Company
HQ: Cambridge, MA
503 Employees
Year Founded: 2018

What We Do

Quantori is the end-to-end data, technology, and digital services partner of choice for leading biopharma and healthcare organizations across the globe.

We develop cutting-edge data and technology systems, applications, and infrastructures for biotech, pharmaceutical, and healthcare companies to accelerate drug discovery and improve patient outcomes. Our innovative approach harnesses the power of data engineering and informatics, machine learning, emerging technologies, and cloud expertise to bridge the gap between meaningful data and patient success, supporting every phase of the drug development process. Quantori also boasts a growing healthcare business that helps organizations optimize volumes of complex data sets to drive data to knowledge, knowledge to actionable insights, and insights to value. Quantori’s data scientists and informaticians understand the nature of data at a granular level, which is required for powering the future of precision medicine.

• 20+ Years Serving the Life Science & Healthcare Sectors
• Deep Domain Expertise
• Over 800 experts including scientists, software engineers, data scientists
• Blue-Chip Roster of Biopharma Clients
• 1,500+ Digital IT Projects

Contact Quantori today to learn how we can help accelerate your innovation pipeline through the power of data and digital IT.

Website: www.quantori.com
Email: [email protected]
Twitter: @Quantori_USA

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