Principal Software Engineer (AI Systems & Data Pipelines)

IONLACE is a place for rebels. We are on a mission to rewrite the timelines of breakthroughs in medicine.

You will be joining a team with experience from leading biotechnology companies and institutions across the world. You will be working at the cutting edge of machine learning and synthetic biology. We operate as a fast-paced startup with our office and lab at the Karolinska Institute in Stockholm. Join us and build the future.

We are looking for a Principal Engineer / Engineering Lead to build the core systems powering our AI-driven agentic protein engineering platform. This is a hands-on senior engineering role where you will design and deliver systems while guiding others in technical best practices. You’ll work across the full stack, building production systems that integrate complex biological data, ML model outputs, and user-friendly scientific interfaces.

A critical part of the role is developing systems that integrate feedback from the Design–Build–Test–Learn (DBTL) cycle, incorporating in-house wet lab experimental data into dry lab computational pipelines, enabling rapid iteration and continuous improvement in our protein engineering workflows.

You will need both the ability to ship code at speed and plan system architecture from day one. Over time, this position can remain a senior individual contributor role or expand into more formal management, depending on your strengths and ambitions.

Build, Design, and Scale

• Write and deliver production-grade features and infrastructure in Python (FastAPI, PostgreSQL) and JavaScript/React, Tailwind, Next.js. Review and debug code written by the team.

• Drives decisions that influence the product design, application functionality, and technical operations and processes.

• Plan and implement architectures for high-performance protein engineering pipelines.

• Translate ambitious product and research requirements into clear technical milestones.

• Operationalize AI workflows from research prototypes into reproducible, production-ready systems used daily by scientists.

Agentic AI & Interfaces

• Build intelligent interfaces that integrate agentic tools into scientists’ workflows.

• Develop seamless full-stack integrations between AI agents, user inputs, and large-scale biological datasets.

Systems & Infrastructure

• Deploy and maintain containerized workflows (Docker, Kubernetes) in cloud-native environments (GCP preferred).

• Create high-throughput data integration pipelines connecting experimental, computational, and AI-driven outputs.

Wet-Dry Lab Data Integration

• Design and implement systems to capture and process wet lab experimental data in near real-time.

• Incorporate this feedback into computational models and protein design workflows, enabling rapid iteration through the DBTL cycle.

• Collaborate closely with wet lab scientists to ensure data quality, interoperability, and traceability across the platform.

Technical Guidance

• Conduct code reviews, share best practices, and help engineers solve complex technical challenges.

• Contribute to project planning to ensure timelines are realistic and delivery is on track.

Technical Expertise

• Proven track record of shipping production systems in Python (FastAPI, PostgreSQL) and JavaScript/TypeScript (React, Next.js).

• Strong background in distributed systems, scalable architectures, and data-intensive applications.

AI/ML & Agentic Systems

• Experience deploying ML models into production, ideally with multi-agent orchestration (LangGraph, Pydantic, or custom frameworks).

• Familiarity with MLOps best practices, model lifecycle management, and CI/CD workflows.

Data Integration

• Experience designing data systems that bridge laboratory instrumentation and computational workflows.

• Familiarity with handling experimental datasets, scientific data formats, and lab data management systems is a plus.

Domain Expertise

• Bonus: experience with computational biology, protein engineering, or biotech data workflows.

IONLACE is an equal opportunity employer and we actively seek to create a diverse and inclusive workplace. We welcome applications from all qualified individuals regardless of their background.